miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Tamarix hispida



ABOUT THIS RECORD

ID: MNEST045589
species: Tamarix hispida
source: microPC, original name: miR169

Taxonomy by NCBI:
Tamarix hispida Tamarix Tamaricaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGCCAAGGATGACTTGCCT

miRNA*
GCAGTCTCCTTGGCT

mismatches: 0
bulges: 2

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pre-miRNA
AGCCAAGGATGACTTGCCTACTCTTCTTTTCATCGTGGTAGTGAATCACCATGTAGGGGTAGGTAGGCAGTCTCCTTGGCT

dot-bracket secondary structure
(((((((((.((((.(((((((..(((((.(((.(((((.....))))).))).)))))..))))))))))))))))))))


SIMILARITIES
miRBase sly-MIR169d: 0.00001

PMRD sly-miR169d: 0.00001

microPC miR169: 9e-41
UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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